Score E
Sequences producing significant alignments: (bits) Value
gb|AC005868.1|AC005868 Homo sapiens 12q24.2 PAC RPCI5-944M2... 68 4e-10
gb|AC023602.5|AC023602 Homo sapiens 3 BAC RP11-16N5 (Roswel... 60 9e-08
gb|AF227510.1|AF227510 Homo sapiens chromosome 21 map 21q22... 60 9e-08
gb|AC007628.3|AC007628 Genomic sequence of Homo sapiens clo... 60 9e-08
gb|AC004804.1|AC004804 Homo sapiens 12p13.3 PAC RPCI5-927J1... 60 9e-08
emb|AL353898.10|AL353898 Human DNA sequence from clone RP4-... 60 9e-08
emb|AL355485.9|AL355485 Human DNA sequence from clone RP11-... 60 9e-08
emb|Z93783.6|HS377F16 Human DNA sequence from clone RP3-377... 60 9e-08
emb|AL109842.7|HSDJ726A1 Human DNA sequence from clone RP4-... 60 9e-08
emb|AL034451.26|HS191E19 Human DNA sequence from clone 191E... 60 9e-08
Alignments
>gb|AC005868.1|AC005868 Homo sapiens 12q24.2 PAC RPCI5-944M2 (Roswell Park Cancer Institute
Human PAC Library) complete sequence
Length = 96180
Score = 67.9 bits (34), Expect = 4e-10
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||||||||||||||||
Sbjct: 15551 gtccggcctgggcgacagagcaagactccgtctc 15584
Score = 50.1 bits (25), Expect = 9e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| |||||||||||||||||||||
Sbjct: 35471 gcctgggtgacagagcaagactccgtctc 35443
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| |||||||| ||||||||||||
Sbjct: 75774 gcctgggagacagagcgagactccgtctc 75746
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||||||||||||| |||||
Sbjct: 30680 gcctgggcaacagagcaagactctgtctc 30708
Score = 40.1 bits (20), Expect = 0.087
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactcc 29
||||||| ||||||||||||||||
Sbjct: 5418 gcctgggtgacagagcaagactcc 5441
Score = 36.2 bits (18), Expect = 1.4
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagact 27
|||||||| |||||||||||||
Sbjct: 89577 gcctgggcaacagagcaagact 89598
>gb|AC023602.5|AC023602 Homo sapiens 3 BAC RP11-16N5 (Roswell Park Cancer Institute Human BAC
Library) complete sequence
Length = 96959
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 64263 gtccggcctgggcgacagagcgagactccgtctc 64230
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 21805 gtccggcctgggcgacagagcgagactccgtctc 21838
Score = 50.1 bits (25), Expect = 9e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| ||||||||||||
Sbjct: 62426 gcctgggcgacagagcgagactccgtctc 62398
Score = 38.2 bits (19), Expect = 0.34
Identities = 22/23 (95%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactc 28
|||||||||||||||| ||||||
Sbjct: 87535 gcctgggcgacagagcgagactc 87513
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagac 26
|||||||| ||||||||||||
Sbjct: 20415 gcctgggcaacagagcaagac 20395
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 14 gacagagcaagactccgtctc 34
|||||||||||||||| ||||
Sbjct: 17438 gacagagcaagactccatctc 17458
>gb|AF227510.1|AF227510 Homo sapiens chromosome 21 map 21q22.1 clone PAC B14273, complete
sequence
Length = 118018
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 71364 gtccggcctgggcgacagagcgagactccgtctc 71397
Score = 58.0 bits (29), Expect = 4e-07
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 2 tccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||||||||| |||||
Sbjct: 72630 tccggcctgggcgacagagcaagactctgtctc 72598
Score = 50.1 bits (25), Expect = 9e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| ||||||||||||
Sbjct: 100449 gcctgggcgacagagcgagactccgtctc 100477
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| ||||||| ||||
Sbjct: 22961 gcctgggcgacagagcgagactccatctc 22989
Score = 42.1 bits (21), Expect = 0.022
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 14 gacagagcaagactccgtctc 34
|||||||||||||||||||||
Sbjct: 108818 gacagagcaagactccgtctc 108798
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||||||||
Sbjct: 59023 gcctgggcgacagagagagactccgtctc 58995
Score = 40.1 bits (20), Expect = 0.087
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactcc 29
||||||| ||||||||||||||||
Sbjct: 39600 gcctgggtgacagagcaagactcc 39623
Score = 36.2 bits (18), Expect = 1.4
Identities = 18/18 (100%)
Strand = Plus / Minus
Query: 17 agagcaagactccgtctc 34
||||||||||||||||||
Sbjct: 79187 agagcaagactccgtctc 79170
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 14 gacagagcaagactccgtctc 34
|||||||||||||||| ||||
Sbjct: 65147 gacagagcaagactccatctc 65167
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| ||||||| ||||||||||||
Sbjct: 11455 gcctgggtgacagagtgagactccgtctc 11483
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagac 26
||||||| |||||||||||||
Sbjct: 77407 gcctgggtgacagagcaagac 77427
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||| ||||
Sbjct: 116530 gcctgggcgacagagtgagactccatctc 116502
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| |||||| |||||
Sbjct: 47257 gcctgggcgacagagtgagactctgtctc 47285
>gb|AC007628.3|AC007628 Genomic sequence of Homo sapiens clone N0576M10 from chromosome 18,
complete sequence
Length = 140356
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 48369 gtccggcctgggcgacagagcgagactccgtctc 48402
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 139526 gtccggcctgggcgacagagcgagactccgtctc 139493
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||| |||||||||||||||
Sbjct: 59130 gcctgggcaacagtgcaagactccgtctc 59102
>gb|AC004804.1|AC004804 Homo sapiens 12p13.3 PAC RPCI5-927J10 (Roswell Park Cancer Institute
Human PAC library) complete sequence
Length = 108879
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 56595 gtccggcctgggcgacagagcgagactccgtctc 56562
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 20015 gtccggcctgggcgacagagcgagactccgtctc 20048
Score = 50.1 bits (25), Expect = 9e-05
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| ||||||||||||||||||||
Sbjct: 96651 gcctgggcaacagagcaagactccgtctc 96679
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| |||||||||||||||| ||||
Sbjct: 6640 gcctgggtgacagagcaagactccatctc 6612
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| |||||| |||||
Sbjct: 35120 gcctgggcgacagagcgagactctgtctc 35092
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| ||||||| ||||||||||||
Sbjct: 67969 gcctgggcaacagagcgagactccgtctc 67997
Score = 42.1 bits (21), Expect = 0.022
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 10 gggcgacagagcaagactccgtctc 34
|||||||||||||||||||| ||||
Sbjct: 33308 gggcgacagagcaagactccatctc 33332
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||||||||||||| |||||
Sbjct: 25216 gcctgggcaacagagcaagactctgtctc 25244
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||| ||||| ||||
Sbjct: 6331 gcctgggcgacagagcaaaactccatctc 6303
Score = 40.1 bits (20), Expect = 0.087
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactcc 29
|||||||||||||||| |||||||
Sbjct: 31018 gcctgggcgacagagcgagactcc 30995
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||| ||||
Sbjct: 80836 gcctgggcgacagagtgagactccatctc 80864
Score = 34.2 bits (17), Expect = 5.4
Identities = 23/25 (92%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccg 30
||||||||||||||| ||||||||
Sbjct: 99150 gcctgggcgacagagagagactccg 99174
>emb|AL353898.10|AL353898 Human DNA sequence from clone RP4-758J24 on chromosome 1p32.1-33,
complete sequence [Homo sapiens]
Length = 97375
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 20232 gtccggcctgggcgacagagcgagactccgtctc 20199
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||||||||||||||
Sbjct: 17123 gcctgggcgacagagcaagactccgtctc 17151
Score = 50.1 bits (25), Expect = 9e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||||| |||||
Sbjct: 66735 gcctgggcgacagagcaagactctgtctc 66707
Score = 48.1 bits (24), Expect = 4e-04
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 2 tccggcctgggcgacagagcaagactccgtct 33
||||||||||| |||||||||| |||||||||
Sbjct: 79031 tccggcctgggtgacagagcaaaactccgtct 79062
Score = 46.1 bits (23), Expect = 0.001
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactc 28
|||||||||||||||||||||||
Sbjct: 94501 gcctgggcgacagagcaagactc 94523
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||| ||||||||||||| ||||
Sbjct: 28382 gcctgggcgatagagcaagactccatctc 28410
Score = 38.2 bits (19), Expect = 0.34
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 8 ctgggcgacagagcaagactccgtctc 34
|||||||||||||| ||||||| ||||
Sbjct: 54670 ctgggcgacagagcgagactccatctc 54696
Score = 36.2 bits (18), Expect = 1.4
Identities = 21/22 (95%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagact 27
||||||| ||||||||||||||
Sbjct: 44464 gcctgggggacagagcaagact 44443
Score = 36.2 bits (18), Expect = 1.4
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagact 27
|||||||||||||| |||||||
Sbjct: 60346 gcctgggcgacagaacaagact 60367
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagac 26
|||||||| ||||||||||||
Sbjct: 54832 gcctgggcaacagagcaagac 54852
Score = 34.2 bits (17), Expect = 5.4
Identities = 23/25 (92%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccg 30
|||||||| | ||||||||||||||
Sbjct: 9994 gcctgggcaatagagcaagactccg 9970
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| ||||| | ||||||||||||
Sbjct: 68726 gcctgggcaacagaccgagactccgtctc 68754
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagac 26
|||||||| ||||||||||||
Sbjct: 80072 gcctgggcaacagagcaagac 80052
>emb|AL355485.9|AL355485 Human DNA sequence from clone RP11-240M20 on chromosome 13, complete
sequence [Homo sapiens]
Length = 149684
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 126160 gtccggcctgggcgacagagcgagactccgtctc 126193
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 138251 gtccggcctgggcgacagagcgagactccgtctc 138218
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||||||||||||||
Sbjct: 127318 gcctgggcgacagagcaagactccgtctc 127290
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||||||||||||| |||||
Sbjct: 140224 gcctgggcaacagagcaagactctgtctc 140196
Score = 40.1 bits (20), Expect = 0.087
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 11 ggcgacagagcaagactccgtctc 34
||||||||||||||||||| ||||
Sbjct: 147109 ggcgacagagcaagactccttctc 147132
Score = 38.2 bits (19), Expect = 0.34
Identities = 25/27 (92%)
Strand = Plus / Minus
Query: 8 ctgggcgacagagcaagactccgtctc 34
||||| |||||||| ||||||||||||
Sbjct: 12534 ctgggtgacagagcgagactccgtctc 12508
>emb|Z93783.6|HS377F16 Human DNA sequence from clone RP3-377F16 on chromosome 22 Contains part
of one or two novel genes, ESTs and GSSs, complete
sequence [Homo sapiens]
Length = 83250
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
|||| |||||||||||||||||||||||||||||
Sbjct: 59850 gtccagcctgggcgacagagcaagactccgtctc 59817
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||||||||||||||
Sbjct: 54262 gcctgggcgacagagcaagactccgtctc 54290
Score = 52.0 bits (26), Expect = 2e-05
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 9 tgggcgacagagcaagactccgtctc 34
||||||||||||||||||||||||||
Sbjct: 77546 tgggcgacagagcaagactccgtctc 77571
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||||||||||| |||||||
Sbjct: 74631 gcctgggcaacagagcaagaccccgtctc 74659
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||| |||||||||| |||||
Sbjct: 13944 gcctgggcgacacagcaagactctgtctc 13916
Score = 42.1 bits (21), Expect = 0.022
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 14 gacagagcaagactccgtctc 34
|||||||||||||||||||||
Sbjct: 64156 gacagagcaagactccgtctc 64136
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||||||||||||| |||||
Sbjct: 43363 gcctgggcaacagagcaagactcagtctc 43391
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||| |||||||||||||| |||||
Sbjct: 44649 gcctgggccacagagcaagactctgtctc 44621
Score = 40.1 bits (20), Expect = 0.087
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 7 cctgggcgacagagcaagactccgtctc 34
|||||||||||||| |||||||| ||||
Sbjct: 3323 cctgggcgacagagtaagactccatctc 3350
Score = 40.1 bits (20), Expect = 0.087
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtct 33
||||||| |||||||| |||||||||||
Sbjct: 48389 gcctgggtgacagagccagactccgtct 48416
Score = 38.2 bits (19), Expect = 0.34
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactc 28
|||||||||||| ||||||||||
Sbjct: 18671 gcctgggcgacaaagcaagactc 18693
Score = 38.2 bits (19), Expect = 0.34
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 16 cagagcaagactccgtctc 34
|||||||||||||||||||
Sbjct: 18980 cagagcaagactccgtctc 18998
Score = 36.2 bits (18), Expect = 1.4
Identities = 24/26 (92%)
Strand = Plus / Plus
Query: 9 tgggcgacagagcaagactccgtctc 34
|||| |||||||||||||||| ||||
Sbjct: 24555 tgggtgacagagcaagactccatctc 24580
Score = 36.2 bits (18), Expect = 1.4
Identities = 28/30 (93%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 6 gcctgggcgacaga-gcaagactccgtctc 34
|||||||||||||| |||||||||| ||||
Sbjct: 68460 gcctgggcgacagaggcaagactccatctc 68431
Score = 34.2 bits (17), Expect = 5.4
Identities = 20/21 (95%)
Strand = Plus / Minus
Query: 14 gacagagcaagactccgtctc 34
|||||||||||||||| ||||
Sbjct: 31606 gacagagcaagactccatctc 31586
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||| ||||
Sbjct: 77702 gcctgggcgacagagtgagactccatctc 77730
Score = 34.2 bits (17), Expect = 5.4
Identities = 23/25 (92%)
Strand = Plus / Minus
Query: 10 gggcgacagagcaagactccgtctc 34
|||| |||||||||||||| |||||
Sbjct: 41273 gggcaacagagcaagactctgtctc 41249
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| | |||| |||||
Sbjct: 81756 gcctgggcgacagagcgaaactctgtctc 81728
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||| ||||||||| ||||||||||||
Sbjct: 11092 gcctgagcgacagagtgagactccgtctc 11120
>emb|AL109842.7|HSDJ726A1 Human DNA sequence from clone RP4-726A1 on chromosome 6q22.2-23.1
Contains GSSs, complete sequence [Homo sapiens]
Length = 120998
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 1671 gtccggcctgggcgacagagcgagactccgtctc 1704
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||||||||||||||
Sbjct: 43975 gcctgggcgacagagcaagactccgtctc 43947
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||||||||
Sbjct: 76807 gcctgggcgacagagtgagactccgtctc 76835
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||| | |||||| |||||
Sbjct: 61515 gcctgggcgacagaacgagactctgtctc 61487
>emb|AL034451.26|HS191E19 Human DNA sequence from clone 191E19 on chromosome 6q23.2-24.2,
complete sequence [Homo sapiens]
Length = 110885
Score = 60.0 bits (30), Expect = 9e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 1 gtccggcctgggcgacagagcaagactccgtctc 34
||||||||||||||||||||| ||||||||||||
Sbjct: 55729 gtccggcctgggcgacagagcgagactccgtctc 55762
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||||||||||||||
Sbjct: 63562 gcctgggcgacagagcaagactccgtctc 63534
Score = 58.0 bits (29), Expect = 4e-07
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||||||||||||||||
Sbjct: 63733 gcctgggcgacagagcaagactccgtctc 63705
Score = 50.1 bits (25), Expect = 9e-05
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| ||||||||||||
Sbjct: 13643 gcctgggcgacagagcgagactccgtctc 13615
Score = 46.1 bits (23), Expect = 0.001
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactc 28
|||||||||||||||||||||||
Sbjct: 47618 gcctgggcgacagagcaagactc 47596
Score = 46.1 bits (23), Expect = 0.001
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactc 28
|||||||||||||||||||||||
Sbjct: 50011 gcctgggcgacagagcaagactc 50033
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| |||||||||||||||| ||||
Sbjct: 1715 gcctgggagacagagcaagactccctctc 1687
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| |||||| |||||
Sbjct: 37055 gcctgggcgacagagcgagactctgtctc 37083
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| ||||||| |||||||||||||
Sbjct: 9443 gcctgggtgacagagtaagactccgtctc 9471
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| |||||| |||||
Sbjct: 60593 gcctgggcgacagagcgagactctgtctc 60565
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||||||||
Sbjct: 99734 gcctgggcgacagagtgagactccgtctc 99762
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| ||||||||||||
Sbjct: 180 gcctgggcgacagagtgagactccgtctc 208
Score = 42.1 bits (21), Expect = 0.022
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| ||||||||||||||| |||||
Sbjct: 91621 gcctgggtgacagagcaagactctgtctc 91593
Score = 36.2 bits (18), Expect = 1.4
Identities = 21/22 (95%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagact 27
|||||||| |||||||||||||
Sbjct: 35758 gcctgggcaacagagcaagact 35779
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Minus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||| ||||||| ||||||||||||
Sbjct: 72168 gcctgggtgacagagtgagactccgtctc 72140
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
||||||||||||||| |||| |||||||
Sbjct: 96788 gcctgggcgacagagtaagatcccgtctc 96816
Score = 34.2 bits (17), Expect = 5.4
Identities = 26/29 (89%)
Strand = Plus / Plus
Query: 6 gcctgggcgacagagcaagactccgtctc 34
|||||||||||||||| ||| || |||||
Sbjct: 16102 gcctgggcgacagagcgagagtctgtctc 16130
Database: nt
Posted date: Aug 4, 2000 10:06 PM
Number of letters in database: -2,133,335,288
Number of sequences in database: 651,732
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 129976
Number of Sequences: 651732
Number of extensions: 129976
Number of successful extensions: 114545
Number of sequences better than 10.0: 9880
length of query: 68
length of database: 2,161,632,008
effective HSP length: 19
effective length of query: 49
effective length of database: 2,149,249,100
effective search space: 105313205900
effective search space used: 105313205900
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 10 (19.8 bits)
S1: 12 (24.3 bits)
S2: 17 (34.2 bits)
