• BLAST - Basic Blast Alignment Search
• Entrez  - Protein Sequence Search
• MMDB -The Molecular Modelling Database
• 3D Model gateway guide

 

• SWISS-PROT and TrEMBL   - Search Protein sequences
• PROSITE - ScanProsite - Protein against PROSITE
• SWISS-2DPAGE  - Two-dimensional polyacrylamide gel electrophoresis
• SWISS-3DIMAGE- 3D images of proteins
• Pattern and profile searches
• Primary structure analysis
• Secondary structure prediction
• Transmembrane regions detection
• Alignment
• SWISS-MODEL  An Automated Comparative Protein Modelling Server
• SWISS-MODEL Repository - Search a database of automatically generated protein models
• ExPASy - Tools

 
 

• Fasta3   - Database Search
• Blast     -  Basic Aligment Search tool
• Tool      -  General Tool for Analysis Protein
• WebMol -  Java PDB Viewer
• 3D modelling

 

• Protein Sequence Analysis
• 3 D Structure Analysis
• Pfam homepage

 

• General protein sequence/pattern searches
• Species-Specific protein sequence searches
• Protein secondary structure prediction
• Sequence utilities
• Multiple sequence alignments
• BCM protein secondary structure prediction

Standfor Bioinformation Center

• Recognize
• Identify
• Scan
• eMotif
• Alion
• 3D-Motif

Protein Family Database Search Engines
 

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